Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNGTVNKVILVGNLGRNPEIRTMQNGKEMANFSIATSEGWTDKFSGVRSEKTEWHNIVIFSEGLVKVVKDFVRKGSKVYIEGSLKTRKWTDQNGSERYTTEVVLQNFNGTLTLLDSRNNAASSDYKSNEYKQDETGQKDQYENFDSEVKEELIDDEIPF
4MZ9 Chain:A ((2-115))
-ASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGK-LAEVASEYLRKGSQVYIEGQLRTRKWTDQSGQDRYTTEVVV-NVGGTMQMLGG-------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4MZ9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46793 for 699 contacts (-66.9/contact) +
2D Compatibility (PS) -12553 + (NN) -4490 + (LL) 2056
1D Compatibility (HY) -12000 + (ID) 3250
Total energy: -77030.0 ( -110.20 by residue)
QMean score : 0.634
(partial model without unconserved sides chains):
PDB file :
Tito_4MZ9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MZ9-query.scw
PDB file :
Tito_Scwrl_4MZ9.pdb
: