Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLPDKIIYEGKAKFIIETKDPLTVIQYFKDEVTAFNKEKYKIIEGKGTINNRISTFIMETLEKAGINTHFIKTLSEREQLVKKLKIIPLEIVVRNIAAGSFCKRFNIKEGEKLAFPIIEFFYKNDGLADPMVNENHVLYFGWLSYEEMEEIKTITIKINTVLIDLFLNAGIDLVDLKLEFGRPINDNTKITLADEISPDNCRLWDKNTHKKLDKDVFRLNLGNLKEAYLEVAKRLSVKLC |
2YWV Chain:A ((8-237)) | ----QLLYEGKAKKIYATDEPDVLWVEYKDSATAFNGEKKATIAGKGRLNNEISSLLFLKLREAGIANHFIEKLSPTEQLVRRVTIIPLEVVVRNVVAGSLAKRIGLEEGTPLEAPLVEFYYKNDDLGDPLLLEDHIFILKLASREEVAALKQAALAVNDVLRLHFAERNVRLIDFKLEFGR--TADGAILLADEISPDTCRLWDAKTNEKLDKDVFRRDLGSLTDAYEVILQRLGGE-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YWV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87991 for 1811 contacts (-48.6/contact) +
2D Compatibility (PS) -24670 + (NN) -4784 + (LL) 488
1D Compatibility (HY) -23200 + (ID) 5650
Total energy: -145807.0 ( -80.51 by residue)
QMean score : 0.369
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