Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHVHKNVVEFFLNQELNISDPDKDGWTSLHYAVQRGCLEVVKFLARKGKSINVENAYGSKPVHRAASGGHKNVVEFFLIKE
4HQD Chain:A ((49-125))
---HKEIVKLLISKGADVNAKDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYAAKEGHKEIVKLLISKG
General information:
TITO was launched using:
RESULT:
Template:
4HQD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30673 for 564 contacts (-54.4/contact) +
2D Compatibility (PS) -8332 + (NN) -5373 + (LL) 444
1D Compatibility (HY) -4400 + (ID) 1450
Total energy: -49784.0 ( -88.27 by residue)
QMean score : 0.464
(partial model without unconserved sides chains):
PDB file :
Tito_4HQD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HQD-query.scw
PDB file :
Tito_Scwrl_4HQD.pdb
: