Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYYDDGIPVFDSLDKLTKPNSMKVVSSDSSEKGDIVLEPLESGFALTLGNALRRVMLSSLIGSAVYGIKIDGITHEFTSIQGVREDVTDIVLNMGMLRCKLNGTSNKCLSLSAKGPCQVLAGMIETDDQCSIVNKDLLICTLG-QDVELNMTIYVASGKGYLPV-TKYKENEFLKPMNEQDLISFIPVNALYSPINRVSYRVENSRVGQVTDKDKLILSVETDGTISPSQAVDSAARILQEQLQPFIS-SDISYKKSQVSSPSGYKDLGYDPILLRKVDEMELSVRSHNCLKNENITYIGDLVQKTESEMLRTANFGRKSLNEIKAVLNNFGLSLGMDIPDWPPKDIDELARQHTDED |
| 4JK1 Chain:A ((20-325)) | ----------------------------SSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVEIDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGDVEIVKPQHVICHLTDENASISMRIKVQRGRGYVPASTRIHSEEDERP------IGRLLVDACYSPVERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQPEVKEEKPE------FDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSLTEIKDVLASRGLSLGMRLENWPPAS------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JK1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -168023 for 2059 contacts (-81.6/contact) +
2D Compatibility (PS) -31797 + (NN) -12124 + (LL) 2268
1D Compatibility (HY) -28800 + (ID) 7200
Total energy: -245676.0 ( -119.32 by residue)
QMean score : 0.506
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