Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
TVDIADIRSKSSQELYEILVNLRKEFVNLIFQKKLGQCNNISRFSL-----IRKSIARILTVLNERRIEGKSA
2WW9 Chain:N ((4-65))
-VKAYELRTKSKEQLASQLVDLKKELAELKVQK-------LSRPSLPKIKTVRKSIACVLTVINEQQREAVRQ
General information:
TITO was launched using:
RESULT:
Template:
2WW9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25247 for 291 contacts (-86.8/contact) +
2D Compatibility (PS) -5975 + (NN) -2048 + (LL) 136
1D Compatibility (HY) -4000 + (ID) 1400
Total energy: -38534.0 ( -132.42 by residue)
QMean score : 0.550
(partial model without unconserved sides chains):
PDB file :
Tito_2WW9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WW9-query.scw
PDB file :
Tito_Scwrl_2WW9.pdb
: