Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMGIKFLNPVTPSSRGTVLVSKIGLSRGKPEKSLAFGKKSSGGRNNNGRITIRHKGGGHKKKYRIIDFKRNRND-QGVVEKIEYDPNRSGFLALVSYKCDDTKSYILAPQGIKPGDIVMSGSGIDILPGNCLPLKGIPIGSFVHGVELKPGSGAVIARAAGCYAQVVGRDGNYVLLRLRSGQVRLVLSSCKATIGVVSNPDRKNRKLGKAGRSRWLGVRPTVRGVAMNPVDHPHGGGEGKTSGGRHPVTPWGVATKGKKTRKKNKFSDKYIKQLKG
2J28 Chain:C ((5-264))-------PTSPGRRHVVKVVNPELHKGKPFAPLLEKNSKSGGRNNNGRITTRHIGGGHKQAYRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYK-DGERRYILAPKGLKAGDQIQSGVDAAIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVARDGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGRNF-GKHPVTPWGVQTKGKKTR-SNKRTDKFIVRR--


General information:
TITO was launched using:
RESULT:

Template: 2J28.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -11996 for 1751 contacts (-6.9/contact) +
2D Compatibility (PS) -27542 + (NN) -16577 + (LL) 664
1D Compatibility (HY) -13200 + (ID) 7900
Total energy: -76551.0 ( -43.72 by residue)
QMean score : 0.256

(partial model without unconserved sides chains):
PDB file : Tito_2J28.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2J28-query.scw
PDB file : Tito_Scwrl_2J28.pdb: