Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSISLSVLDDSVLIKPINEEKQ--GGIVLPSSAEKKPTKGEVIAIGEGSRNSSGE-RIALTVKAGDKVFYRQWAGTEIEHGSEKLIVMKESDILAIIK
1HX5 Chain:A ((5-97))
-----IKPLEDKILVQA-----TTASGLVIP------PQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVV-
General information:
TITO was launched using:
RESULT:
Template:
1HX5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33251 for 504 contacts (-66.0/contact) +
2D Compatibility (PS) -8295 + (NN) 1625 + (LL) 1108
1D Compatibility (HY) -10400 + (ID) 1500
Total energy: -50713.0 ( -100.62 by residue)
QMean score : 0.412
(partial model without unconserved sides chains):
PDB file :
Tito_1HX5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HX5-query.scw
PDB file :
Tito_Scwrl_1HX5.pdb
: