Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVRRITLNSNFMFGASDIKSLPNESAP----EIAFAGRSNVGKSSLINLLINSKKAARVSSKPGCTRQINFYSMYNDKFRLVDLPGYGCSHASKDETIQYLGLVEYYLIHRRNLRRVFVLIDSKVRLKEIDKDFIYWLTYNNINFDVVLTKIDKVDRENLDAIIESTRKWINNESVSIRQISVRVKYEMTKVRDEFFKFTR
3PR1 Chain:A ((15-160))
---------------------PGDYPPPLKGEVAFVGRSNVGKSSLLNALFN--------------RSINFY-LVNSKYYFVDLPGY-------KERMLWKRLVEDYFKNRWSLQMVFLLVDGRIPPQDSDLMMVEWMKSLNIPFTIVLTKMDKVKMSERAKKLEEHRKVFSKYGEYTIIPTSSVTGEGISELLDLISTLL
General information:
TITO was launched using:
RESULT:
Template:
3PR1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76613 for 798 contacts (-96.0/contact) +
2D Compatibility (PS) -13274 + (NN) -6880 + (LL) 2136
1D Compatibility (HY) -12800 + (ID) 2850
Total energy: -110281.0 ( -138.20 by residue)
QMean score : 0.594
(partial model without unconserved sides chains):
PDB file :
Tito_3PR1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3PR1-query.scw
PDB file :
Tito_Scwrl_3PR1.pdb
: