Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDSEKIELIFEKLKQSNPIPKIELSYTNHFTLLVAIVLSARTTDVSVNKITKELFSIANTPEKMLNLGQSELKKHISSIGLYNSKAKNIIELSRILVERHTSKVPTNFDDLVSLPGVGRKSANVFLNSGLGIPTLAVDTHVFRVSNKIGLVKEKD-VFKTEKSLLNVVPKKYLLYAHHWLVLHGRYVCKAQKPSCKTCIIHDLCEFECKRYKV
1ORN Chain:A ((8-216))
---QQIRYCLDEMAKMFPDAHCELVHRNPFELLIAVVLSAQCTDALVNKVTKRLFEKYRTPHDYIAVPLEELEQDIRSIGLYRNKARNIQKLCAMLIDKYNGEVPRDRDELMKLPGVGRKTANVVVSVAFGVPAIAVDTHVERVSKRLGFCRWDDSVLEVEKTLMKIIPKEEWSITHHRMIFFGRYHCKAQSPQCPSCPLLHLCREGKKRMRK
General information:
TITO was launched using:
RESULT:
Template:
1ORN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -132402 for 1644 contacts (-80.5/contact) +
2D Compatibility (PS) -21688 + (NN) -13632 + (LL) 104
1D Compatibility (HY) -21200 + (ID) 4350
Total energy: -193168.0 ( -117.50 by residue)
QMean score : 0.521
(partial model without unconserved sides chains):
PDB file :
Tito_1ORN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ORN-query.scw
PDB file :
Tito_Scwrl_1ORN.pdb
: