Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLSPCPRAKVCFSPGEDCAVLIISEIDQSKESVLVQEYTFTLETIARALINAKERSVDVEVILDKSQLHSKYSVINKLFSNGIPVWIDDKPKIAHNKVIIVDNQK--------------------VITGSFNLTKTAKKGNAENLLIIKNYPELVQQYVKNWEIRKSQSYKYAS
4GEL Chain:A ((63-188))
---------------------IVEQIDRAVYSIDLAIYTFTSLFLADSIKRALQRGVIIRIISDGEMVYSKGSQISMLAQLGVPVRVPITTNLMHNKFCIIDGFERVEEIRLLRKLKFMRPCYSIVISGSVNWTALGLGGNWENCIITADDKLTATFQAEFQRMWRAFAKT---
General information:
TITO was launched using:
RESULT:
Template:
4GEL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71239 for 757 contacts (-94.1/contact) +
2D Compatibility (PS) -11909 + (NN) -3684 + (LL) 1264
1D Compatibility (HY) -9200 + (ID) 1900
Total energy: -96668.0 ( -127.70 by residue)
QMean score : 0.570
(partial model without unconserved sides chains):
PDB file :
Tito_4GEL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4GEL-query.scw
PDB file :
Tito_Scwrl_4GEL.pdb
: