Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEIISLNNNSCSVEIKKKLLSIITKVIEKNTWTQAHAAERLGVDQPKISQIKNGKTDGFSLERLLGFLKKFDHEITITITESQAVKPETEKVKREVGSP
3DNV Chain:B ((12-74))
-----------------QLANAMKLVRQQNGWTQSELAKKIGIKQATISNFENNP-DNTTLTTFFKILQSL--ELSMTLCDAK----------------
General information:
TITO was launched using:
RESULT:
Template:
3DNV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26098 for 397 contacts (-65.7/contact) +
2D Compatibility (PS) -7245 + (NN) -5408 + (LL) 2172
1D Compatibility (HY) -5200 + (ID) 850
Total energy: -42629.0 ( -107.38 by residue)
QMean score : 0.658
(partial model without unconserved sides chains):
PDB file :
Tito_3DNV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DNV-query.scw
PDB file :
Tito_Scwrl_3DNV.pdb
: