Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIHVAIYMLLLCMSAMLYRIAKLSDIYNKALAFNHFSTQVILLITAVSIILDSFFLVDIALLYASVSFISTIALMRLMLL |
3AJF Chain:A ((39-50)) | ----------------FLQMIRKPDDPENLSVFLKSAIWMLSHKRDLPGHYRLPLTCLVSTYSEYFVELKP--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AJF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 659 for 36 contacts (18.3/contact) +
2D Compatibility (PS) -1113 + (NN) 1235 + (LL) 3140
1D Compatibility (HY) 0 + (ID) 50
Total energy: 3871.0 ( 107.53 by residue)
QMean score : -0.009
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