Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNFKSVVLCILDGWGNGIGDSKY-NAISNANPPCWQYISSNYPRCSLSACGTDVGLPDGQIGNSEVGHMNICSGRVVMQSLQRIDREIKTIENNKN--LRSFISDLKDKNGVCHIMGLVSDGGVHSHQKHISTLANKISQHEIK-VVIHAFLDGRDTLPNSGKKCVQEFEENIKGNDI-RIATVSGRYYAMDRDNRWERTIETYEAIAFARATCHNNVMSLIDNNYQNNITDEFIRPTVIGDYKG-----IELKDGVLLANFRADRMIQLASILLGKTGYTEV------AKFSSILSMMKYKEDLQIPCLFPPAFFTNTLGEIIADNKLRQLRIAETEKYAHVTFFFNCGKEEPFSNEERILIPSPKVETYDLQPEMSAFELTEKLVGKIRSQEFTLIVANYANPDMVGHTGNMEAAKKAVLAVDDCLAKVLNTVKEINDAVLIVTADHGNVECMFDEKNNTPHTAHTLNKVPFIIYPNSCNNLKLKDGR-LSDIAPTILQLLGIKKPDEMTGSSLIV |
| 1O98 Chain:A ((2-510)) | -SKKPVALIILDGFA--LRDETYGNAVAQANKPNFDRYWNEYPHTTLKACGEAVGLPEGQMGNSEVGHLNIGAGRIVYQSLTRINIAIREGEFDRNETFLAAMNHVKQHGTSLHLFGLLSDGGVHSHIHHLYALLRLAAKEGVKRVYIHGFLDGRDVGPQTAPQYIKELQEKIKEYGVGEIATLSGRYYSMDRDKRWDRVEKAYRAMVYGEGPTYRDPLECIEDSYKHGIYDEFVLPSVIVREDGRPVATIQDNDAIIFYNFRPDRAIQISNTFTNED-FREFDRGPKHPKHLFFVCLTHFSETVAGYVAFKPTNLDNTIGEVLSQHGLRQLRIAETEKYPHVTFFMSGGREEEFPGEDRILINSPKVPTYDLKPEMSAYEVTDALLKEIEADKYDAIILNYANPDMVGHSGKLEPTIKAVEAVDECLGKVVDAILA-KGGIAIITADHGNADEVL-TPDGKPQTAHTTNPVPVIV---TKKGIKLRDGGILGDLAPTMLDLLGLPQPKEMTGKSLIV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1O98.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -287378 for 4605 contacts (-62.4/contact) +
2D Compatibility (PS) -52218 + (NN) -10867 + (LL) -216
1D Compatibility (HY) -44800 + (ID) 11200
Total energy: -406679.0 ( -88.31 by residue)
QMean score : 0.492
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