Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFIQIEETPNPNTLKFLPGFAILNERETADFSNPDEIKNSKLAADLFQIEHVIRVFFGHDFISVTKSDGISWDILKVEILTTVMDHFTSGGKALDRKGVNDNNIPDEEFFDENDIEIVNRIKELMENYIKPAVAQDGGDIKFRGYKDGIVYVELQGACSGCPSAAITLKQGVQNMLCYHIPEVSGIETTL
2JNV Chain:A ((85-145))
------------------------------------------------------------------------------------------------------------------------------DQVRPYLTADGGDVALHEIAGNVVRLKLQGACGSCPSSLITIKRGIERRLMEKIPDVAAVE---
General information:
TITO was launched using:
RESULT:
Template:
2JNV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41674 for 372 contacts (-112.0/contact) +
2D Compatibility (PS) -6895 + (NN) -5329 + (LL) 8404
1D Compatibility (HY) -6000 + (ID) 1150
Total energy: -52644.0 ( -141.52 by residue)
QMean score : 0.458
(partial model without unconserved sides chains):
PDB file :
Tito_2JNV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JNV-query.scw
PDB file :
Tito_Scwrl_2JNV.pdb
: