Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKISKFVFLFLFCLGFNLQASGTLNIEEVITRKGFKFLFVENCDLPKVSLNISFKDAGYAYENVEKQGLTWFTSLAIQEGAGKNDAKDFAKKLEDKGISLNFIAGLEAFRASLNTLSENLEEAVSLLSDAIMHPKVDLEGLNR----AFEKAKVNFNNLEKDPYFIAGKELNTLLFKKHPYSKSEYGILDTIMSITRDDVLAYVKRNFTKDNIVISVVGCTTKEEVSALLDKYLSKLPLKRSKVRKIPVKNNFGPAESKNIFM--------DIPQSVIFFAQKGIAYEDPDYYSASVLINALGGMGLNSILMKELRQNLGITYGVFAHIIPNKHGNAIVGNMSTDSSTAGKAILAVKDTLSRIKREGIDEQLFKDAKTILVNNLTFFL-------SNNTNTAMLLDDMQINDRDVNRINNYADIINDVKLEKVNELASSLLDPENLFFVKVGRNT |
| 3HDI Chain:A ((10-392)) | ---------------------------------GVRIITEKMSTVRSVSIGI-WVGTGSRYESAEENGISHFLEHMFFKGTNTRSAQEIAEFFDSIGGQVNAFTSKEYTCYYAKVLDDHAGQAIDTLSDMFFHSTFQKEELEKERKVVFEEIKM----VDDTPDDIVHDLLSSATYGKHSLGYPILGTVETLNSFNEGMLRHYMDRFYTGDYVVISVAGNVHDE----LIDK------IKETFSQVKPTTYNY--QGEKPMFLPNRIVRKKETEQAHLCLGYPGLPIGDKDVYALVLLNNVLGG-SMSSRLFQDIREKRGLCYSVFSYHSSFRDSGMLTIYAGTGHDQLDDLVYSIQETTSALAEKGLTEKELENGKEQLKGSLMLSLESTNSRMSRNGKNELLLKKHRSLDEMIEQINA-------VQKQDVSRLAKILLSASPSISLINANGE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HDI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107722 for 2924 contacts (-36.8/contact) +
2D Compatibility (PS) -39206 + (NN) -17558 + (LL) 4032
1D Compatibility (HY) -17600 + (ID) 4600
Total energy: -182654.0 ( -62.47 by residue)
QMean score : 0.516
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