Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MARNNPNIKLLYIRDLFAKECKEIEEYCILGKKQHIQISPEEGKLLSLFIKIHKVRSIVEIGTLYGYSSICMAKALPEYGHIYTIENNPKHFKIAKKNFNAFNMSNKITLIVGNALEKLAELSAKAPYDMIFIDADKAGYPKYLDWAESYIKQDGLIVADNTLLLNTVFLKSPPKEVLEKSWRAMREFNYRLSDEKKYCSILIPTDEGMTIALKLT
4OA8 Chain:A ((48-227))
------------------------------------QLGTVEGQMLQLLIRMAGIHSIVEVGTCVGFSAICMAHALPSKGHIYTIEKDYENVVTANQNIVNCKLEDKITVLHGEALAQLNTLKEMAPFDMIFIDANKSSYLAYLNWAKMYIRKGGLIVADNTFLFGSVFDEHPTEKVSSNAHASMRAFNDELANKEKYLSTIIPTSEGMMVSIKLT
General information:
TITO was launched using:
RESULT:
Template:
4OA8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110496 for 1464 contacts (-75.5/contact) +
2D Compatibility (PS) -19577 + (NN) -6860 + (LL) 3120
1D Compatibility (HY) -21600 + (ID) 4250
Total energy: -159663.0 ( -109.06 by residue)
QMean score : 0.668
(partial model without unconserved sides chains):
PDB file :
Tito_4OA8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OA8-query.scw
PDB file :
Tito_Scwrl_4OA8.pdb
: