Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDLV-ALKFIAIGLSVLGILGAGLGVANIFSTMLSGLARNPESEGKMKIYVYVGAGMVEFTGLLAFVLAMLLMFVA
3ZRY Chain:J ((2-74))
-QLVLAAKYIGAGISTIGLLGAGIGIAIVFAALINGVSRNPSIKDTVFPMAILGFALSEATGLFCLMVSFLLLF--
General information:
TITO was launched using:
RESULT:
Template:
3ZRY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55919 for 466 contacts (-120.0/contact) +
2D Compatibility (PS) -7481 + (NN) -4616 + (LL) 544
1D Compatibility (HY) -8400 + (ID) 1300
Total energy: -77172.0 ( -165.61 by residue)
QMean score : 0.118
(partial model without unconserved sides chains):
PDB file :
Tito_3ZRY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZRY-query.scw
PDB file :
Tito_Scwrl_3ZRY.pdb
: