Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNSLNSKTTLNVSGKSYGYFSLNAASKFLGIDLAKLPCSLKVLLENLLRNEDEVNVRLDDIKTLAGC-VKKHVNHEISYKPARVLMQDFTGVPAIVDLASMRSYVKKKGGNPSKINPSVPVDLVIDHSVQVDSYGNTSAFGKNVELEIKRNLERYQFLKWGESSFTNFRVVPPGTGICHQVNLEYLAQVVCNESGVVYPDTLVGTDSHTTMVNGLSVLGWGVGGIEAESVMIGQPISMVIPEIVGFKLMGRLPEGVTATDLVLTITNILRAKGVVGKFVEFYGDGLDYLSLADRATIANMAPEYGATCGFFPIDQKTLDYLSLTGRPEGLIKLVEVYAKEQGLWRS----GEELAFFDILELDLSGVEPVMAGPKRPQDKVSLSQVAESFST---------SFSVNESKENDK-----------LQDGSVVIAAITSCTNTSNPSVMIAAGLIARKAIKFGIKSKPWVKTSLAPGSRVVTKYLEKSGLQKNLNTLGFNLVGYGCTTCIGNSGPLNKDIEDDIKNKNLTVAAVLSGNRNFEGRIHPLVKANYLASPPLVVVYALAGTVQVDLTKDSICKDKNGNNVYLKDIWPTNNEIEDCVRSVVTCEMFMQKYKDVFSGDEHWQKIKYERGEIYNWDTKSTYIQNPPYFDDLLAGNDKDNVIDIKNARVLAMFGDSVTTDHISPAGNIASNSPAGIYLKNLGIEPQDFNSYGSRRGNHNVMMRGTFANIRIKNEMISNEGGYTKHIPSQETMSIFDTAMRYKEEAVPLVVIAGKEYGAGSSRDWAAKGTLLLGIKAVIAESFERIHRSNLVGMGVLPLIFQGGVTRRIFDSSEIISIKGE-----IVPSGNL--ECIIKRKDNSEQSIQLKCCVQTATEVKYLMSGGVLSYILAQSS |
| 3SNP Chain:A ((34-884)) | -----------------------------------RLPFSIRVLLEAAVRNCDKFLVKKEDIENILNWNVTQHMNIEVPFKPARVILQDFTGVPSVVDFAAMRDAVKKLGGDPEKINPICPVDLVIDHS------------------EFERNRERFEFLKWGSKAFRNMRIIPPGSGIIHQVNLEYLARVVFDQDGYYYPDSLVGTDSHTTMIDGLGVLGWGVGGIEAEAVMLGQPISMVLPQVIGYRLMGKPHPLVTSTDIVLTITKHLRQVGVVGKFVEFFGPGVAQLSIADRATIANMCPEYGATATFFPVDEVSIKYLVQTGRDESKVKQIRKYLQAVGMFRDYSDPSQDPDFTQVVELDLKTVVPCCSGPKRPQDKVAVSDMKKDFESCLGAKQGFKGFQVAPDHHNDHKTFIYNDSEFTLSHGSVVIAAITSSTNTSNPSVMLGAGLLAKKAVDAGLNVKPYVKTSLSPGSGVVTYYLRESGVMPYLSQLGFDVV------------PLPEPVVEAITQGDLVAVGVLSGNRNFEGRVHPNTRANYLASPPLVIAYAIAGTIRIDFEKEPLGTNAKGQQVFLRDIWPTREEIQAVERQYVIPGMFTEVYQKIETVNASW--------KLYLWNPKSTYIKSPPFFENLTL--DLQPPKSIVDAYVLLNLGDSVTTDHISPAGNIARNSPAARYLTNRGLTPREFNSYGSRRGNDAIMARGTFANIRLLNRFLNKQAPQTIHLPSGETLDVFDAAERYQQEGHPLIVLAGKEYGSGSSRDWAAKGPFLLGIKAVLAESYERIHRSNLVGMGVIPLEYLPG------ENADSLGLTGRERYTIIIPE-NLTPRMHVQVKLDTGKTFQAVIRFDTDVELTYFHNGGILNYMIRKMA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SNP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -414691 for 6854 contacts (-60.5/contact) +
2D Compatibility (PS) -83003 + (NN) -24091 + (LL) 2972
1D Compatibility (HY) -82400 + (ID) 21500
Total energy: -622713.0 ( -90.85 by residue)
QMean score : 0.503
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