Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLNRSTDTKRKEMIELKGPEICTDRSRENLIVCLHGRGSSGNNFVHLAKVMSKSLPNSCFVAPNAPSKR-EIGNGYQ---WFSLEDRS--EEVLYNGVKNAASIVNHFIDTKLKEFSLKDTQLSLVGFSQGAMLAIHTALTRPQC-CASVVA---YSGKFLSPSRVAPKIKSRPNVCVIHGDADNVVPFSFFDLTVKALKENGVNV--EGYPIRTLGHLINKEGIKLGVEFIKKNFKK
1AUO Chain:A ((17-206))
------------------------------VIWLHGLGADRYDFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELEVSAKMVTDLIEAQ-KRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTFGDELELSASQQRIPALC-LHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYP---MGHEVLPQEIHDIGAWLAARLG-
General information:
TITO was launched using:
RESULT:
Template:
1AUO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110525 for 1347 contacts (-82.1/contact) +
2D Compatibility (PS) -19202 + (NN) -11097 + (LL) 2680
1D Compatibility (HY) -14800 + (ID) 2650
Total energy: -155594.0 ( -115.51 by residue)
QMean score : 0.600
(partial model without unconserved sides chains):
PDB file :
Tito_1AUO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AUO-query.scw
PDB file :
Tito_Scwrl_1AUO.pdb
: