Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDLGPIIENWHEWLRCYRSYSSNTLESYMRDLKDFISFLSAHIGEEVNVGSLEKLSVPELRSWFSFRYARGINARSNTRALSVIRNFFKYIKNNYEVNNEAVFSLSRPIQRRTLPKALSISDIKTLVDFFLHNYSLQETHSSLSFQYATKKKESVLSTQLYKHCNFSLPGFQCSDTRKLIINKRTLSIKNWIPVLSIGTTEGNTKTSVKEIKLLDLGEPWIIKREIAIIVLLYGTGLRISEALNLKVSDISNESLIVTGKGDKQRQVFILPVVKMFIQEYVKACPYLSVNNEAQHLFVGVRGKKLGRTYVANRLQKIRRMLNLPEIVSPHAFRHSFATHLLQENVDIRFIQQLLGHSSLETT-QVYTHLNYQDVFNMYKNFQQSLEKDKKLKL |
| 3NKH Chain:A ((171-229)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LREAAKDVGIDKEVSSHILRHSHISLLSQQGVSLKAIMDRVGHSDHRTTLSIYSHVTEQMDKDMMNKLEQVKLG------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NKH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29402 for 331 contacts (-88.8/contact) +
2D Compatibility (PS) -6174 + (NN) -2759 + (LL) 23164
1D Compatibility (HY) -1600 + (ID) 950
Total energy: -17721.0 ( -53.54 by residue)
QMean score : 0.549
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