Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVENEGVLLVLSSPSGAGKTTILERLLERST--NLVRSVSMTTRKPRPGEINGKDYFFVTKKEFHELCEAGQMLEYARVFENFYGIPKSFIEQNLSSGISVLLSIDWQGAFHLFELMREKVISVFILPPSMEELRLRLQKRNSDSASEIEHRLAEAQKEMSKRDKYDYVVINDDIDKSVEEISSILDKERLKRSGV
2ANC Chain:A ((3-191))
-----QGTLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRQPRPGEVHGEHYFFVNHDEFKEMISRDAFLEHAEVFGNYYGTSREAIEQVLATGVDVFLDIDWQGAQQIRQKM-PHARSIFILPPSKIELDRRLRGRGQDSEEVIAKRMAQAVAEMSHYAEYDYLIVNDDFDTALTDLKTIIRAERLRMSRQ
General information:
TITO was launched using:
RESULT:
Template:
2ANC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88764 for 1330 contacts (-66.7/contact) +
2D Compatibility (PS) -21373 + (NN) -14391 + (LL) 668
1D Compatibility (HY) -15600 + (ID) 4250
Total energy: -143710.0 ( -108.05 by residue)
QMean score : 0.633
(partial model without unconserved sides chains):
PDB file :
Tito_2ANC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ANC-query.scw
PDB file :
Tito_Scwrl_2ANC.pdb
: