Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MHRYDVVVVGGGHAGCEAAAAAARLGASTLLITHKISTIGEMSCNPAIGGVAKGIVVREVDALDGIMGRAIDQASIHSVILNSSRGAAVWGPRAQADRKLYKKAIQEIILNHDNLTVKEESVDDFLIESNSNGEPYIKAIITSSGKQILTSKVVLTTGTFLQGMVHIGEQTTPSGRMGDKSAVELANTLKKYDFKLGRLRTGTPPRLDRSTINWSILEEQVGNNPPMPFSYLTEKINQPQ-VSCFITYTNENTHRIIQANLHRSASSYLNDIVAPRYCPSIEAKVKKFAEKNSHQIFLEPEGLDNITVYPNGISNSLPIEVQREMINSIKGLENAEILRPGYAVEYDYIDPRELFHTLETKKVKGLYFAGQINGTTGYEEAAGQGIIAGINAALSASQKKESFVLHRTDSYIGVMIDDLVTKGVTEPYRLFTSRAEYRLAIRSDNADRRLTQKGYNISLVSYKRYSALQNKLKSIKQLEEKLESLKITP--EQLRFCGIKISHDGIRK-TALDLLSYPNIDWNKLQEIWPELTNVTRWNDNKADQTVIQVVDTRIQKKNADSSVTRWNDKTGYWNDSKTTSNTIKNEICEAVAIEAKYKPYLVRQEADMKFLREEMNTQIPTNFNYSQIKGLSSEVIEKLQAIKPATIGIAKQIQGITPAAIVSILVYLRNRKTKVAANSA |
3G05 Chain:A ((33-572)) | ---FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVEDLIVENDR-----VVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLD-----------SIPLSRRLRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITHTNEKTHDVIRSNLDRS-P------------PSIEDKVMRFADRNQHQIFLEPEGLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLFFAGQINGTTGYEEAAAQGLLAGLNAA-RLSDDKEGWAPARSQAYLGVLVDDLCTLGTKEPYRMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVTPSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALT--DEQAAEQVEIQVKYEG------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3G05.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -181469 for 4626 contacts (-39.2/contact) +
2D Compatibility (PS) -54377 + (NN) -13349 + (LL) 11032
1D Compatibility (HY) -42800 + (ID) 12900
Total energy: -293863.0 ( -63.52 by residue)
QMean score : 0.370
|
|
|