Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVGAVQIKKTGGPEVLEFIDKSIGEPKGEEVLIRHTAIGLNRYDLEHRKGVRKIKGLPSVLGVEAVGVIEKLGKKIDDSLQIGDRVGYCTAPPGAYCEKRVIHQKYLVKIPDEIPDEVVAAVLFKGMTAHYLINQSYKIKPGAFVLVHGANGGLGQIICQWAKDKKGVVIGSVSSDKKMEVALQNGCTYAINYNDKNFVSKIMEITQNRGVGAVYDPIGYSTSRLSFESLSKFGIYVSYGQISG-IAPVSFSLLSSR-SLFATGTSIYHYKRDRFALVLTAMEIFEMVKKKLLTVRINKKYKFDEIIKAHHDMENRKVSGLNIIKVF |
3JYN Chain:A ((1-323)) | MAKRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPSGLGAEGAGVVEAVGDEVT-RFKVGDRVAYGTGPLGAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQDTWLTSLDSVAPRGLVVSFGNASGPVSGVNLGILAQKDSVYVTRPTLGSYANNAQNLQTMADELFDMLASGKLKVDGIEQYALKDAAKAQIELSARRTTGSTILIP- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JYN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -233098 for 2889 contacts (-80.7/contact) +
2D Compatibility (PS) -34833 + (NN) -17099 + (LL) -12
1D Compatibility (HY) -21200 + (ID) 5700
Total energy: -311942.0 ( -107.98 by residue)
QMean score : 0.476
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