Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGSPEFAINALNSLLKSKNEVVAVYTKAPKPSGRGQKLTKSPVHIIAEESGIEVCTPTSLKPLVEQEKFKKFKPDVAVVAAYGLILPKEILNILKYSCINIHPSLLPRWRGAAPIQHTILAGDRKTGISIMQLDGGLDSGPILKQKKFLVEKNDNYKTLHDKLSKLGSNLLMEVIDEIEKHP--PLEQSDDGACYADKI--EDYKIYASDICEVAYRKVKAF--YPKAFVKIEHKRVRILDADFEVDASLTSGQGKIINDN---MHISLKSGTLIPKIVQMEGRNSCNIKDFVRGLKFSMVKKFIE |
| 2FMT Chain:A ((10-300)) | -GTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVSLRPQENQQLVAELQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAAPIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEIEGQPVKVWKASV-IDTATNAAPGTILEANKQGIQVATGDGILNLLSLQPAGKKAMSAQDLLNSRREWFVPGNRL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FMT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125994 for 2211 contacts (-57.0/contact) +
2D Compatibility (PS) -30406 + (NN) -9890 + (LL) 312
1D Compatibility (HY) -22000 + (ID) 5450
Total energy: -193428.0 ( -87.48 by residue)
QMean score : 0.496
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