Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSNFGTKFSAEDFFRDFCPTVDGEVKKERFEQELLALKEETEKRKKLELSTLKGEKAEKKKKLEQELLTLKKRELYRQYVSLATMIPFALLMAIELKKICSDQILLVVISVGLGHTLLPFSVLSLICMLYLIYNNRKIIQKERELENIENGREIEKKKYNCPDIDQCLAYIEVISTVLVIVGQIMDEVSPLKVAEEALFFTASILSFAIAFYNYKKENKENKERETEKLSHAEELSKNNSNIPMAGLMLAGSSVMLIRRVMLITLASSLSPALGLAAIALLIVGSGLITHSYKRELKNVKVSGKSITGASVIDIVDRDSIHICTNM |
| 2RDD Chain:B ((5-34)) | --------------------------------------------------------------------------------------------------------------------LILMLVVFGLIFYFMILRPQQKRTKEHKKLMDS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RDD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4543 for 116 contacts (-39.2/contact) +
2D Compatibility (PS) -3121 + (NN) -1129 + (LL) 24644
1D Compatibility (HY) -4400 + (ID) 300
Total energy: 11151.0 ( 96.13 by residue)
QMean score : 0.027
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