Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRTFQPKNLIRKRRHGFRSRMATRAGRKILNRRRSLGCKKLCA
2K0Q Chain:A ((44-54))
---------------------METRDGTKIIMKGNEIFRLDEAL
General information:
TITO was launched using:
RESULT:
Template:
2K0Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -395 for 34 contacts (-11.6/contact) +
2D Compatibility (PS) -1030 + (NN) 1194 + (LL) 1440
1D Compatibility (HY) -1200 + (ID) 300
Total energy: -291.0 ( -8.56 by residue)
QMean score : 0.152
(partial model without unconserved sides chains):
PDB file :
Tito_2K0Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K0Q-query.scw
PDB file :
Tito_Scwrl_2K0Q.pdb
: