Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHNQVIKHKKKDFSLAFKNKLALSNLFYRGLYISLYAIKERAPEKHVDIIRVGIVISKKAGKATKRNKIKRRLRVLARTNILDISNIGYYYIILTHKNIMQ----ASYKNLRKDITICLKKIK
3Q1R Chain:A ((42-117))
----------------------------------------------LDYSRLGIVVKRKFGKATRRNKLKRWVREIFRRNKGVIPK-GFDIVVIPRKKLSEEFERVDFWTVREKLLNLLKRIE
General information:
TITO was launched using:
RESULT:
Template:
3Q1R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38087 for 409 contacts (-93.1/contact) +
2D Compatibility (PS) -8045 + (NN) -5960 + (LL) 3980
1D Compatibility (HY) -6000 + (ID) 1250
Total energy: -55362.0 ( -135.36 by residue)
QMean score : 0.524
(partial model without unconserved sides chains):
PDB file :
Tito_3Q1R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q1R-query.scw
PDB file :
Tito_Scwrl_3Q1R.pdb
: