Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLKIATWNVNSIRKRVDQ-LCSFIVDDQIDIILLQEIKCTEEQFP------------YVEIEKLGYECIVYGEVARNGVCVLSKH-PILEKFKIDIVEGYQEARYIECLIKHNNQKMRVVSIYVPNGQSLGSHVFEYKLKFLDNLYERMDNLLKNEELIVIAGDYNVAPDEIDVFDPTLLNGQVCFHIKEREKL-KAILNLGFKDAFRMSHPNLQQFSWWRYQGNSLRNNQGMRIDHMLLSPQAVDKLGICYIDDRLRKLENPSDHTPIVSIMEW |
4B5F Chain:A ((1-251)) | MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKNPHGMHGHWHCAEKRGY----------SGVAVYSKRKPDNVQIGMGIEEFDREGRFVRC----DFGRLSVISLYLPSGSSAEERQ-QVKYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKA----VSAHVYKDEKFSDHAPLVVEYDY |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4B5F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -101725 for 1961 contacts (-51.9/contact) +
2D Compatibility (PS) -24924 + (NN) -9954 + (LL) 1816
1D Compatibility (HY) -15200 + (ID) 3850
Total energy: -153837.0 ( -78.45 by residue)
QMean score : 0.442
|
|
|