Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSELAKSTREDIEAKIKKIVLEHIS-KDVEKFNNSSKLSEHGADSLDAVEIIMAAEEEFGIEIPDEDAQKMETMEQIVEYVSNKKNNS
1L0I Chain:A ((4-77))
------------IEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKMTTVQAAIDYINGHQA--
General information:
TITO was launched using:
RESULT:
Template:
1L0I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10145 for 486 contacts (-20.9/contact) +
2D Compatibility (PS) -8101 + (NN) -4671 + (LL) 580
1D Compatibility (HY) -5200 + (ID) 1750
Total energy: -29287.0 ( -60.26 by residue)
QMean score : 0.607
(partial model without unconserved sides chains):
PDB file :
Tito_1L0I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L0I-query.scw
PDB file :
Tito_Scwrl_1L0I.pdb
: