Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSLVLVYTTFSNVKEAKAVSEELLNKKLIICVNIFPKVNSLYLWKGEINSSCEVIAIMKSRSDQVDKIVEKVEAMHSYDQPAIVIIPIEKVNKSFANWVNSVIDVSSIGV
1UKU Chain:A ((1-96))
---MIIVYTTFPDWESAEKVVKTLLKERLIACANL-REHRAFYWWEGKIEEDKEVGAILKTREDLWEELKERIKELHPYDVPAIIRIDVDDVNEDYLKWLIEETKK-----
General information:
TITO was launched using:
RESULT:
Template:
1UKU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58016 for 623 contacts (-93.1/contact) +
2D Compatibility (PS) -10768 + (NN) -4311 + (LL) 444
1D Compatibility (HY) -11200 + (ID) 1750
Total energy: -85601.0 ( -137.40 by residue)
QMean score : 0.633
(partial model without unconserved sides chains):
PDB file :
Tito_1UKU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UKU-query.scw
PDB file :
Tito_Scwrl_1UKU.pdb
: