Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNPIICALDTQDLNEAISLANTLRDKVGMIKLGLEFFAAHGPSGVREVAKCNVPTFLDLKLHDIPNTVAKTVEAIKVLNIEILTLHISGGTKML---EEALSIVKDTKTKLIGVTVLTSMSNEDLSELGIAREVKSQVILFAKLAKKVGLHGIVCSALEAQEVYQECGKDFKIITSGIRV-GFGHDDQKRTATPKEAINSGADYIVIGRPITKSNSPANSAELILKSLS
1EIX Chain:A ((15-241))
-SPVVVALDYHNRDDALAFVDKIDPRDCRLKVGKEMFTLFGPQFVRELQQRGFDIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASGGARMMTAAREALVPFGKDAPLLIAVTVLTSMEASDLVDLGMTLSPADYAERLAALTQKCGLDGVVCSAQEAVRFKQVFGQEFKLVTPGIRPQGSEAGDQRRIMTPEQALSAGVDYMVIGRPVTQSVDPAQTLKAINASLQ
General information:
TITO was launched using:
RESULT:
Template:
1EIX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -157059 for 1897 contacts (-82.8/contact) +
2D Compatibility (PS) -24082 + (NN) -8789 + (LL) 208
1D Compatibility (HY) -15600 + (ID) 4600
Total energy: -209922.0 ( -110.66 by residue)
QMean score : 0.569
(partial model without unconserved sides chains):
PDB file :
Tito_1EIX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EIX-query.scw
PDB file :
Tito_Scwrl_1EIX.pdb
: