Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MMEFTIKRDYFITQLNDTLKAISPRTTLPILTGIKIDAKEHEVILTGSDSEISIEITIPKTVDGEDIVNISETGSVVLPGRFFVDIIKKLPGKDVKLSTNEQFQTLITSGHSEFNLSGLDPDQYPLLPQVSRDDAIQLSVKVLKNVIAQTNFAVSTSETRPVLTGVNWLIQENELICTATDSHRLAVRKLQLEDVSENKNVIIPGKALAELNKIM-SDNEEDIDIFFASNQVLFKVGNVNFISRLLEGHYPDTTRLFPENYEIKLSIDNGEFYHAIDRASLLAREGGNNVIKLSTGDDVVELSSTSPEIGTVKEEVDANDVEGGSLKISFNSKYMMDALKAIDNDEVEVEFFGTMKPFILKPKGDDSVTQLILPIRTY |
3T0P Chain:A ((20-364)) | -------------------KAVPTRTTMAILECILIDASANEIKLMANDMELGIETIIDGTIE--------ERGIIALDAKIFSEIVRKLPDNDVTIETDASFKTVISCEKAKFNIIGKSGDDFSYIPYVERNESIVLSQFTLKEVIRQTIFSIADNDNNKLMTGELFEIEENKLRVVSLDGHRISIRYIEMKNHYDSKKVVVPGKTLQEISKIIPGSADEDVVIYITNNHIVFEFENTTVVSRLIEGEYFKIDQMLSSDYDTKVRINKRELLDCIDRATLLVKE-DKKPIIMNITDGNMELRINSF-IGSMNEDI-DIDKDGKDIMIGFNPKFFIDALRVIDEEEVNLYMVNPKAPCFIK-DDEGKFIYLILPV--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3T0P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -191651 for 2625 contacts (-73.0/contact) +
2D Compatibility (PS) -37311 + (NN) -17131 + (LL) 2152
1D Compatibility (HY) -34800 + (ID) 5950
Total energy: -284691.0 ( -108.45 by residue)
QMean score : 0.544
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