Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATHLSFRQGVQECIPTLLGYAGVGISFGIVASSQNFSILEIILLCLVIYAGAAQFIMCALFIAGTPISAIVLTVFIVNSRMFLLSMSLAPNFKTYGFWNRVGLGSLVTDETFGVAITPYLKGEAINDRWMHGLNITAYLFWAISCVAGALFGEYISNPQTLGLDFAITAMFIFLAIAQFESITKSRLRIYIVLIIAVIVMMLSLSMFMPSYLAILIAATISAALGVMMER |
| 2Y0M Chain:B ((31-48)) | --------------------------------------------------------------------------------------------------------LENLDDSVFSKRHAKLEL------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y0M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2053 for 64 contacts (-32.1/contact) +
2D Compatibility (PS) -1783 + (NN) 582 + (LL) 20640
1D Compatibility (HY) 400 + (ID) 100
Total energy: 17686.0 ( 276.34 by residue)
QMean score : -0.335
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