Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTFKPLPIFILSVLSSLPKARLSKNKIFIVFRFSSVTDKTTQNKKDTREVSRIFYSAIAPDC
2LIF Chain:A ((174-185))
------FSIFLLALLSCI---------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2LIF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3209 for 39 contacts (-82.3/contact) +
2D Compatibility (PS) -1170 + (NN) 101 + (LL) 3372
1D Compatibility (HY) -3200 + (ID) 250
Total energy: -4356.0 ( -111.69 by residue)
QMean score : 0.098
(partial model without unconserved sides chains):
PDB file :
Tito_2LIF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LIF-query.scw
PDB file :
Tito_Scwrl_2LIF.pdb
: