Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMDNKTYEISSAEWEVMNIIWMKKYASANNIIEEIQMQKDWSPKTIRTLITRLYKKGFIDRKKDNKIFQYYSLVEESDIKYKTSKNFINKVYKGGFNSLVLNFVEKEDLSQDEIEELRNILNKK
1SD6 Chain:A ((5-123))----TYEISSAEWEVMNIIWMKKYASANNIIEEIQMQKDWSPKTIRTLITRLYKKGFIDRKKDNKIFQYYSLVEESDIKYKTSKNFINKVYKGGFNSLVLNFVEKEELSQDEIEELRNILNKK


General information:
TITO was launched using:
RESULT:

Template: 1SD6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -47799 for 710 contacts (-67.3/contact) +
2D Compatibility (PS) -12583 + (NN) -4199 + (LL) 116
1D Compatibility (HY) -18000 + (ID) 5900
Total energy: -88365.0 ( -124.46 by residue)
QMean score : 0.579

(partial model without unconserved sides chains):
PDB file : Tito_1SD6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1SD6-query.scw
PDB file : Tito_Scwrl_1SD6.pdb: