Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFFKQFYEDNFSQASYLIGCQRTGEAMIIDPIRD-LTKYLKVADKEGFTITKAAETHIHADFASGIRDVANKLNASIYVSDEGKDEFNYKNMPKQTHFVKHQDIIYLGKIKLEVLHTPGHPPESISFLLTDEGGGSSIPMGLFSGDFIFVGDVGRPDLLEKAVNVEGSTKIGAKQMYQSI-QFAATLPDYIQIWPGHGAGSPCGKALGSLPTTTLGYEKINNWAFNVKDETSFIETL-TLNQPAPPHHFSQMKKINQFGMQMYQPYNVYPSSSNTQTAFDLRSKEAFHGGHMHGTINIPFNKTFINQIGWYLDYD
4YSB Chain:A ((1-210))MIFRQLFDSESSTYTYLIGDEATRQAVLIDPVLEQVDRDLQMVAELDLTLTHVFDTHVHADHITASGALRERTQATVVGSVNGASCANVQ--------VRHGDEVRVGQLVFQVLATPGHTDDSISYLLGDR---------VFTGDALLVRGNGRTDFQNG----------NASQLYDSLTRVLFTLPDETLVYPGHDYK---GRTV-----TSIAEEKRHNPRVAGKSREEFIHIMENLNLPRP----------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4YSB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108811 for 1767 contacts (-61.6/contact) +
2D Compatibility (PS) -22418 + (NN) -9565 + (LL) 3808
1D Compatibility (HY) -13600 + (ID) 3550
Total energy: -154136.0 ( -87.23 by residue)
QMean score : 0.427

(partial model without unconserved sides chains):
PDB file : Tito_4YSB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YSB-query.scw
PDB file : Tito_Scwrl_4YSB.pdb: