Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFFKQFYEDNFSQASYLIGCQRTGEAMIIDPIRD-LTKYLKVADKEGFTITKAAETHIHADFASGIRDVANKLNASIYVSDEGKDEFNYKNMPKQTHFVKHQDIIYLGKIKLEVLHTPGHPPESISFLLTDEGGGSSIPMGLFSGDFIFVGDVGRPDLLEKAVNVEGSTKIGAKQMYQSI-QFAATLPDYIQIWPGHGAGSPCGKALGSLPTTTLGYEKINNWAFNVKDETSFIETL-TLNQPAPPHHFSQMKKINQFGMQMYQPYNVYPSSSNTQTAFDLRSKEAFHGGHMHGTINIPFNKTFINQIGWYLDYD |
4YSB Chain:A ((1-210)) | MIFRQLFDSESSTYTYLIGDEATRQAVLIDPVLEQVDRDLQMVAELDLTLTHVFDTHVHADHITASGALRERTQATVVGSVNGASCANVQ--------VRHGDEVRVGQLVFQVLATPGHTDDSISYLLGDR---------VFTGDALLVRGNGRTDFQNG----------NASQLYDSLTRVLFTLPDETLVYPGHDYK---GRTV-----TSIAEEKRHNPRVAGKSREEFIHIMENLNLPRP---------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YSB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108811 for 1767 contacts (-61.6/contact) +
2D Compatibility (PS) -22418 + (NN) -9565 + (LL) 3808
1D Compatibility (HY) -13600 + (ID) 3550
Total energy: -154136.0 ( -87.23 by residue)
QMean score : 0.427
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