Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSIVLFLIVFILLSLIVSRYLYSVALNVPSKIDVVFNPIEKLIYQLIGTKLEHMSGKTYIKHFLLFNGLMGGLSFVLLLIQQWLFLNPNHNLNQSVSLAFNTMASFLTNTNLQHYAGETDL--SYLTQMCVITFLMFTSAASGYAVCIAMLRRLTGMTDVIGNFYQDIT-RFIVRVLIPFALIISLFLISQGTPQTLKGNLVIETLSGVKQTIAYGPMASLESIKHLGTNGGGFLGANSSTPFENPTYWSNYAEALSMMLIPGSLVFLFGRMLKTKLQIHPHAIMIFVAMFVMFIGFLVTCLYFEFAGNPVLHHLGIAGGNMEGKETRFGIGLSALFTTITTAFTTGTVNNMHDSLTPLGGMVPMVLMMLNAVFGGEGVGLMNMLIYVMLTVFICSLMIGKTPSYLGMKIEGKEMKLIALSFLVHPLLILVFSALAFIVPGASDALTNPQFHGVSQVLYEFTSSSANNGSGFEGLGDNTVFWNISTGIVMLLARYIPIVLQILIVSSLVNKKTYQQHTQDVPINNLFFSSVLIIFIILLSGLTFLPDLMLGPIGEQLLLHA |
| 3PJZ Chain:A ((204-350)) | --------------------------------------------------------------------------------------------GMTPFDAISHSFSTIAIGGFSTHDASMGYFDSYAINLI-TVVFLLI-SACNFTLHFAAFASGGVH---PKYYWKDPEFRAFIFIQVLLFLVCFLLL-LKH-HSYTS----------PYDAFDQ---ALFQTVSISTTAGFTTTGFADW------PLFLPVLLLFSSFIGGCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PJZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -46586 for 1022 contacts (-45.6/contact) +
2D Compatibility (PS) -15570 + (NN) -7022 + (LL) 32452
1D Compatibility (HY) -5200 + (ID) 800
Total energy: -42726.0 ( -41.81 by residue)
QMean score : 0.189
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