Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MISTSEHSIFKNPAKNDGLRVRTIEVSEKFTSSAQNSDTIKKVVSQNNGHVLPIIAQFLLDNTNDVTSLFQKEDSVFYQLLSTESSNTGIRMIKHYATLTTTAHILNQSLDLQLNVSSIKNYLLSYHNETVSERS--LADKAMDTIVQFIAENLGKFSQQTRLANMIQNFGILSLKDDYIEVKIIRNVFDKMLTDSQFEDTKNVIDALDNAGKLVSDRDRKTTKRNAKDDTGKSTSLVFYQIKIDLDYADVLGLQSQGRDNVIQKHSNPSQFKNTNLEEFMKSENTTLIVF |
4FDG Chain:B ((185-294)) | ----------------------------------------------------------------------------------------------------------------QFRLIPEKTKLIDWQKAVIQERPEEVPSGQLPRQLEIILED--DLVDSARPGDRVKVTGILDIKQDSPVKRGSRAVFDIYMKVSSIEVSQKVLDEV-----IISEEDEKKIKDLAKD-------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FDG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 13712 for 502 contacts (27.3/contact) +
2D Compatibility (PS) -10813 + (NN) 3246 + (LL) 11140
1D Compatibility (HY) -6000 + (ID) 1400
Total energy: 9885.0 ( 19.69 by residue)
QMean score : -0.054
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