Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNYDKK---MINRINRIQGQLNGIIKMMEEGKDCKDVITQISASKSSLQRLMGIIISENLIECVKVAADDEESSQELINEAVNLLVKSK
4UIG Chain:A ((46-112))
-GYHKQKAEHLKRLRRIEGQIRGLQRMVDEDVYCIDILTQVSASTKALQSFALQLLEEHLRHCVADAA---------------------
General information:
TITO was launched using:
RESULT:
Template:
4UIG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67 for 308 contacts (-0.2/contact) +
2D Compatibility (PS) -6681 + (NN) -408 + (LL) 1736
1D Compatibility (HY) -5200 + (ID) 1250
Total energy: -11870.0 ( -38.54 by residue)
QMean score : 0.455
(partial model without unconserved sides chains):
PDB file :
Tito_4UIG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4UIG-query.scw
PDB file :
Tito_Scwrl_4UIG.pdb
: