Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATKKDVHDLFLNHVNSNAVKTRKMMGEYIIYYDSVVIGGLYDNRLLVKATKSVRHQLQDNTLVSPYPGAKEMILIPDITEAINLTNLFELIKNDLKN
4BQ8 Chain:A ((138-180))
-----------------------KITG-YIIYYSTDVNAEIHDWVIEPVVGNRLTHQIQELTLDTPY-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4BQ8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9199 for 175 contacts (-52.6/contact) +
2D Compatibility (PS) -4419 + (NN) -536 + (LL) 3936
1D Compatibility (HY) -2400 + (ID) 800
Total energy: -13418.0 ( -76.67 by residue)
QMean score : 0.092
(partial model without unconserved sides chains):
PDB file :
Tito_4BQ8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BQ8-query.scw
PDB file :
Tito_Scwrl_4BQ8.pdb
: