Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MICSQTLFRYPTHMIFLMKHNYMIDCIILLNNLLQTCHFTLKIYIISDDILQVIYK
2MJF Chain:B ((21-28))
----QELLKYNT--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2MJF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 267 for 18 contacts (14.8/contact) +
2D Compatibility (PS) -774 + (NN) -119 + (LL) 5148
1D Compatibility (HY) -1200 + (ID) 200
Total energy: 3122.0 ( 173.44 by residue)
QMean score : -0.601
(partial model without unconserved sides chains):
PDB file :
Tito_2MJF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2MJF-query.scw
PDB file :
Tito_Scwrl_2MJF.pdb
: