Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKYNNHDKIRDFIIIEAYMFRFKKKVKPEVDMTIKEFILLTYLFHQQENTLPFKKIVSDLCYKQSDLVQHIKVLVKHSYISKVRSKIDERNTYISISEEQREKIAERVTLFDQIIKQFNLADQSESQMIPKDSKEFLNLMMYTMYFKNIIKKHLTLSFVEFTILAIITSQNKNIVLLKDLIETIHHKYPQTVRALNNLKKQGYLIKERSTEDERKILIHMDDAQQDHAEQLLAQVNQLLADKDHLHLVFE
2FNP Chain:A ((108-220))
-----------------------------------------------------------------------------------------------------------------------------------DCFELLSMVTYADKLKSLIKKEFSISFEEFAVLTYISENKEKEYYFKDIINHLNYKQPQVVKAVKILSQEDYFDKKRNEHDERTVLILVNAQQRKKIESLLSRVNKRITEANN------
General information:
TITO was launched using:
RESULT:
Template:
2FNP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67073 for 726 contacts (-92.4/contact) +
2D Compatibility (PS) -12275 + (NN) -9580 + (LL) 12700
1D Compatibility (HY) -10800 + (ID) 1850
Total energy: -88878.0 ( -122.42 by residue)
QMean score : 0.709
(partial model without unconserved sides chains):
PDB file :
Tito_2FNP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FNP-query.scw
PDB file :
Tito_Scwrl_2FNP.pdb
: