Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKVIKMLVVTLAFLLVLAGCSGNSNKQSSDNKDKETTSIKHAMGTTEIKGKPKRVVTLYQGATDVAVSLGVKPVGAVESWTQKPKFEYIKNDLKDTKIVGQEPAPNLEEISKLKPDLIVASKVRNEKVYDQLSKIAPTVSTDTVF-KFKDTTKLMGKALGKEKEAEDLLKKYDDKVAAFQKDAKAKYKDAWPLKASVVNFRADHTRIYAGG-YAGEILNDLGFKRNKDLQKQVDNGKDIIQLTSKESIPLMNADHIFVVKSDP-NAKDAALVKKTESEWTSSKEWKNLDAVKNNQVSDDLDEITWNLAGGYKSSLKLIDDLYEKLNIEKQSK
3TNY Chain:A ((17-295))-----------------------------------EVVTVEHAMGKTEVPANPKRVVILTNEGTEALLELGVKPVGAVKSWTGDPWYPHIKDKMKDVKVVGDEGQVNVETIASLKPDLIIGNKMRHEKVYEQLKAIAPTVFSETLRGEWKDNFKFYAKALNKEKEGQKVVADYESRM----KDLKGKLGDKVNQEISMVRFMPGDVRIYHGDTFSGVILKELGFKRPGDQNKDDFAERNV----SKERISAMDGDVLFYFTFDKGNEKKGS---ELEKEYINDPLFKNLNAVKNGKAY-KVDDVIWNTAGGVIAANLLLDDIEKRF-------


General information:
TITO was launched using:
RESULT:

Template: 3TNY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40333 for 2336 contacts (-17.3/contact) +
2D Compatibility (PS) -29634 + (NN) -13976 + (LL) 4204
1D Compatibility (HY) -22800 + (ID) 5950
Total energy: -108489.0 ( -46.44 by residue)
QMean score : 0.513

(partial model without unconserved sides chains):
PDB file : Tito_3TNY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TNY-query.scw
PDB file : Tito_Scwrl_3TNY.pdb: