Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQNKELIQHAAYAAIERILNEYFREENLYQVPPQNHQWSIQLSELETLTGEFRYWSAMGHHMYHPEVWLIDGKSKKITTYKEAIARILQHMAQSADNQTAVQQHMAQIMSDIDNSIHRTARYLQSNTIDYVEDRYIVSEQSLYLGHPFHPTPKSASGFSEADLEKYAPECHTSFQLHYLAVHQDVLLTRYVEGKEDQVEKVLYQLADIDISEIPKDFILLPTHPYQINVLRQHPQYMQYSEQGLIKDLGVSGDLVYPTSSVRTVFSKALNIYLKLPIHVKITNFIRTNDLEQIERTIDAAQVIASVKDEVETPHFKLM--FEEGYRALLPNPLGQTVEPEMD---LLTNSAMIVREGIPNYHADKDIHVLASLFETMPD-SPI------SKLAQVIEQSGLAPEAWLECYLDRTLLPILKLFSNTGISLEAHVQNTLIELKDGIPDVCFVRDLEGICLSRTIA---TEKQLVPNVVAASSPVVYAHDEAWHRLKYYVVVNHLGHLVSTIGKATRNEV-VLWQLVAHRLMTWKKEYANNAVFVDCVEDLYQTPTIAAKANLMSKL-NDCGANPIYTHIPNP-ICYNKEVSYCESNNS |
| 2W04 Chain:A ((159-587)) | --------------------------------------------------------------------------------------------------------------------------------------YLQSEQGLWFGHPSHPAPKARLWPAHLGQEQWAPEFQARAALHQFEVPVDGL---HIGANGLTPQQVLDGFADQQPASPGHAIICM--HPVQAQLFMQDARVQQLLRDNVIRDLGQSGRVASPTASIRTWFIDDHDYFIKGSLNVRITNCVRKNAWYELESTVLIDRLFRQLLDQHADTLGGLVAAAEPGVVSWSPAAAG-----ELDSHWFREQTGGILRENFCRRTGAERSIMAGTLFARGVDLQPMIQTFLRTHYGEALDDNALL--YWFDDYQTRLLRPVLSLFFNHGVVMEPHLQNSVLVHQQGRPQQVLLRDFEGVKLTDDLGIRYIDDDIHPRV---RQSLLYSREQGWNRIMYCLFINHLSETILALSQGRPQLAPLMWRRVQQQLRAIQGELKQPSPELDA---LIAGHPVACKTNLKVRLA------ASYVRLPSPW--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W04.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -224928 for 3309 contacts (-68.0/contact) +
2D Compatibility (PS) -42464 + (NN) -14766 + (LL) 13200
1D Compatibility (HY) -24800 + (ID) 5600
Total energy: -299358.0 ( -90.47 by residue)
QMean score : 0.286
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