Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNQTILNRVKTRVMHQLVSSLIYENIVVYKASYQDGVGHFTIEGHDSEYRFTAEKTHSFDRIRITSPIERVVGDEADTTTDYTQLLREAVFTFPKNDEKLEQFIVELLQTELKDTQSMQYRESNPPATPETFNDYEFYAMEGHQYHPSYKSRLGFTLSDNLKFGPDFVPNVKLQWLAIDKDKVETTVSRNVVVNEMLRQQVGDKTYEHFVQQIEASGKHVNDVEMIPVHPWQFEHVIQVDLAEERLNGTVLW-LGESDELYHPQQSIRTMSPIDTTKYYLKVPISITNTSTKRVLAPHTIENAAQITDWLKQIQQQDMYLKDELKTVFLGEVLGQSYLNTQLSPYKQTQVYG-----ALGVIWRENIYHMLIDEEDAIPFNALYASDKDGLPFIEKWIKQYGSEA--------WTKQFLAVAIRPMIHMLYYHGIAFESHAQNMMLIHENGWPTRIALKDFHDGVRFKREHLSEAASHLTLKPMPEAHKKVNSNSFIETDDERLVRDFLHDAFFFINIAEIILFIEKQYGIDEQRQWQWVKDIIEAYQEAFPELNNYQHFDLFEPTIQVEKLTTRRLLSDSELRIHHVTNPLGVGGINDATTISET |
2W03 Chain:A ((169-476)) | ---------------------------------------------------------------------------------------------------------------------------------------------GHPSHPAPKARLWPAHLGQEQWAPEFQARAALHQFEVPVDGL------HIGANGLTPQQVLDG----FADQQPASPGHA----IICMHPVQAQLFMQDARVQQLLRDNVIRDLGQSGRVASPTASIRTWF-IDDHDYFIKGSLNVRITNCVRKNAWYELESTVLIDRLFRQ-------LLDQHADTLGGLVAAAEPGVVSWSPAAAGELDSHWFREQTGGILREN-FCRRTGAERSIMAGTLFARGVDLQPMIQTFLRTHYGEALDDNALLYWFDDYQTRLLRPVLSLFFNHGVVMEPHLQNSVLVHQQGRPQQVLLRDF-EGVKL------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W03.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -113545 for 2244 contacts (-50.6/contact) +
2D Compatibility (PS) -30365 + (NN) -8922 + (LL) 23032
1D Compatibility (HY) -9600 + (ID) 4200
Total energy: -143600.0 ( -63.99 by residue)
QMean score : 0.284
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