Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMQQLSLKHRLNNGDSVYGI-FNSIPDPLMIEVIAASGYDFVVIDTEHVAINDETLAHLIRAAEAAHIIPIVRVTAVIDRDIIKVLDMGARGIIVPHVKDRETVEHIVKLSRYYPQGLRSLNGGRMARFGRTPLLDAMEMANEHIMVIAMIEDVEGVMAIDDIAQVEGLDMIVEGAADLSQSLGIPWQTRDDQVTSHVQHIFEVVNAHGKHFCALPREDEDIAKWQAQ-GVQTFILGDDRGKIYRHLSASLATSKQKGDDG
3QZ6 Chain:A ((6-255))
------LKKKLSAGKSVVGTMLNLVYNPDIVRIYAEAGLDYFIVDCEHAAYTFREINHLVSVAKNAGVSVLVRIPQVDRAHVQRLLDIGAEGFMIPGVQSAETMRETVRLAKYPPLGERGVGGSIVTDFKPVNWAEWVQERNDEIFIMAQIEHVKAVEDIDSILAVQGVDAVIFGPRDLSNDLGIIGQTEHPKVYECYEKVYRAADRQGVVKGFFTAADAAKMGWAVERGAQMLLWSGDVAALQTYTAKGVKTIKE-----
General information:
TITO was launched using:
RESULT:
Template:
3QZ6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -179048 for 1956 contacts (-91.5/contact) +
2D Compatibility (PS) -27650 + (NN) -17431 + (LL) 372
1D Compatibility (HY) -18000 + (ID) 3550
Total energy: -245307.0 ( -125.41 by residue)
QMean score : 0.509
(partial model without unconserved sides chains):
PDB file :
Tito_3QZ6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QZ6-query.scw
PDB file :
Tito_Scwrl_3QZ6.pdb
: