Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKNVEKSFIKIGLYFQIAYIVLMAITLCGFVICYGLIFGLFYLLSGSRADYLIVTIVISAIISIFVIILSIVPVIVLASDLFKERISKGVILIVLAIIALVLCNFVSAILWFVSAISILGRKKLVAAADTTTIQKSKGNANQASHKDTCKKELDSQDMMEHPEVKNPTTKNLEGFNEEIHKDEATTKVVSDNTEPPIESKGHVSKKD |
| 3DY5 Chain:A ((790-844)) | --------------------------------------------------------------------------------------------------------------IYGVLAIDTIGRKELIGSGGIVDQSLSLGGGGHVTFMEKCFKEVNLQD-------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DY5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 11782 for 229 contacts (51.4/contact) +
2D Compatibility (PS) -4767 + (NN) 74 + (LL) 14580
1D Compatibility (HY) -2400 + (ID) 700
Total energy: 18569.0 ( 81.09 by residue)
QMean score : 0.167
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