Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTNNKVALVTGGAQGIGFKIAERLVEDGFKVAVVDFNEEGAKAA-ALKL-SSDGTKAIAIKADVSNRDDVFNAVRQTAAQFGDFHVMVNNAGLGPTTPIDTITEEQFKTVYGVNVAGVLWGIQAAHEQFKKFNHGGKIINATSQAGVEGNPGLSLYCSTKFAVRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIAVATAEEAGKPEAWGWEQFTSQIALGRVSQPEDVSNVVSFLAGKDSDYITGQTIIVDGGMRFR
3A28 Chain:C ((2-257))---SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFLASENSNYVTGQVMLVDGGMLY-


General information:
TITO was launched using:
RESULT:

Template: 3A28.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109207 for 2273 contacts (-48.0/contact) +
2D Compatibility (PS) -27433 + (NN) -6948 + (LL) 280
1D Compatibility (HY) -22800 + (ID) 6300
Total energy: -172408.0 ( -75.85 by residue)
QMean score : 0.561

(partial model without unconserved sides chains):
PDB file : Tito_3A28.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3A28-query.scw
PDB file : Tito_Scwrl_3A28.pdb: