Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMFYNILGVLILVMLSTDALDCDIITHLRTSLINFLPIQSLLSALKNPYC
3NUH Chain:B ((494-517))
-------------IIMTDA-DVDG-SHIRTLLLTFF--------------
General information:
TITO was launched using:
RESULT:
Template:
3NUH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3800 for 88 contacts (-43.2/contact) +
2D Compatibility (PS) -2068 + (NN) 398 + (LL) 2880
1D Compatibility (HY) -400 + (ID) 100
Total energy: -3090.0 ( -35.11 by residue)
QMean score : 0.187
(partial model without unconserved sides chains):
PDB file :
Tito_3NUH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NUH-query.scw
PDB file :
Tito_Scwrl_3NUH.pdb
: