Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MERVLITGGAGFIGSHLVDDLQQ-DYDVYVLDNYRTGKREN---IKSLADDHVF------ELDIREYDAVEQIMKTYQFDYVIHLAALVSVAESVEKPILSQEINVVATLRLLEIIKKYNSHIKRFIFASSAAVYGDLPDLPKSDQSLILPLSPYAIDKYYGERTTLNYCSLYNIPTAVVKFFNVFGPRQDPKSQYSGVISKMFDSFEHNKPFTFFGDGLQTRDFVYVYDVVQSVRLIMEHK-DAIGHGYNIGTGTFTNLLEVYRIIGELYGKS-----VEHEFKEARKGDIKHSYADISN-LKALGFVPKYTVETGLKDYFNFEVDNIEEVTAKEVEMS |
| 1SB8 Chain:A ((31-340)) | ----LITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAG--VDYVLHQAALGSVPRSINDPITSNATNIDGFLNML--IAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSLADISKAAKLLGYAPKYDVSAGV---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SB8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159578 for 2561 contacts (-62.3/contact) +
2D Compatibility (PS) -30915 + (NN) -6471 + (LL) 2972
1D Compatibility (HY) -18000 + (ID) 5700
Total energy: -217692.0 ( -85.00 by residue)
QMean score : 0.488
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